Fabiano Lopes Thompson
Instituição:
Universidade Federal do Rio de Janeiro
Centro:
Centro de Ciências da Saúde
Unidade:
Instituto de Biologia
Departamento:
Departamento de Genética/IB
Formação:
-
Ghent University (Belgian Coordinated Collections of Microorganisms, LMG)
| Pós-Doutorado | 2003 - 2004
-
Ghent University
Biochemistry | Doutorado | 1999 - 2003
-
Universidade Federal do Rio Grande
Oceanografia Biológica | Mestrado | 1997 - 1999
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Universidade Federal do Rio Grande
Oceanologia | Graduação | 1992 - 1996
Laboratórios:
Nuvens de Palavras:
Artigos:
(92.33% artigos com DOI)
| Titulo | DOI | Ano |
|---|---|---|
| Leveraging marine biotechnology for an All-Atlantic sustainable blue economy | 10.1016/j.tibtech.2023.12.011 | 2024 |
| Combining Digital and Molecular Approaches Using Health and Alternate Data Sources in a Next-Generation Surveillance System for Anticipating Outbreaks of Pandemic Potential | 2024 | |
| Genomic and physiological characterization of Kitasatospora sp. nov., an actinobacterium with potential for biotechnological application isolated from Cerrado soil | 10.1007/s42770-024-01324-y | 2024 |
| Harnessing Marine Microbiomes to Develop a Sustainable, All-Atlantic Bioeconomy | 10.1002/mlf2.12124 | 2024 |
| The dispersant Corexit 9500 and (dispersed) oil are lethal to coral endosymbionts | 2024 | |
| Water quality in marine and freshwater environments: a metagenomics approach | 10.5753/jidm.2024.2624 | 2024 |
| Core Transcriptome of Hydrogen Producing Marine Vibrios Reveals Contribution of Glycolysis in Their Efficient Hydrogen Production | 2024 | |
| Biosurfactants production by marine yeasts isolated from zoanthids and characterization of an emulsifier produced by Yarrowia lipolytica LMS 24B | 10.1016/j.chemosphere.2024.141807 | 2024 |
| Lost characters and lost taxonomists: Coelocarteriidae fam. nov., Poecilosclerida with and without chelae, to accommodate supposed phloeodictyids (Haplosclerida) | 10.1071/is22017 | 2023 |
| Current Status of Drinking Water Quality in a Latin American Megalopolis | 10.3390/w15010165 | 2023 |
| Machine learning sheds light on physical-chemical and biological parameters leading to Abrolhos coral reef microbialization | 10.1016/j.scitotenv.2023.164465 | 2023 |
| Microbiome diversity from sponges biogeographically distributed between South America and Antarctica | 10.1016/j.scitotenv.2023.163256 | 2023 |
| Diversity of Microbiomes Across a 13,000-Year-Old Amazon Sediment | 10.1007/s00248-023-02202-0 | 2023 |
| P2X7 Receptor Modulation of the Gut Microbiota and the Inflammasome Determines the Severity of Toxoplasma gondii-Induced Ileitis | 10.3390/biomedicines11020555 | 2023 |
| Trace metal concentration along the Brazilian coast: An assessment of the influence of the Doce River plume | 10.1016/j.marpolbul.2023.114640 | 2023 |
| Editorial: Marine epibioses | 10.3389/fevo.2023.1229173 | 2023 |
| Role of ABC Proteins in Secondary Metabolism and Immune (=Defensive) Response in Seaweeds | 10.3390/cells12182259 | 2023 |
| Metagenomic and isotopic signatures of the Amazon River plume into the southern red snapper fish (Lutjanus purpureus) | 10.1016/j.ecss.2023.108440 | 2023 |
| Genome taxonomy of the genus Neptuniibacter and proposal of Neptuniibacter victor sp. nov. isolated from sea cucumber larvae | 10.1371/journal.pone.0290060 | 2023 |
| Genome-resolved metagenomic analysis of Great Amazon Reef System sponge-associated Latescibacterota bacteria and their potential contributions to the host sponge and reef | 10.3389/frmbi.2023.1206961 | 2023 |
| Collapse of scallop Nodipecten nodosus production in the tropical Southeast Brazil as a possible consequence of global warming and water pollution | 10.1016/j.scitotenv.2023.166873 | 2023 |
| Catalyzing progress in the blue economy through joint marine microbiome research across the Atlantic | 10.3389/fmars.2023.1327719 | 2023 |
| Plume layer influences on the Amazon reef sponge microbiome primary producers | 10.3389/fmars.2022.867234 | 2022 |
| Vibrio Clade 3.0: New Vibrionaceae Evolutionary Units Using Genome-Based Approach | 10.1007/s00284-021-02725-0 | 2022 |
| Sponges present a core prokaryotic community stable across Tropical Western Atlantic | 10.1016/j.scitotenv.2022.155145 | 2022 |
| The P2X7 Receptor Promotes Colorectal Inflammation and Tumorigenesis by Modulating Gut Microbiota and the Inflammasome | 10.3390/ijms23094616 | 2022 |
| Letter to Microbial Ecology | 10.1007/s00248-022-02017-5 | 2022 |
| Fluxes of the Amazon River plume nutrients and microbes into marine sponges | 10.1016/j.scitotenv.2022.157474 | 2022 |
| Genomic Analysis Reveals Adaptation of to the Hadal Ocean | 10.1128/aem.00575-22 | 2022 |
| Dissecting Light Sensing and Metabolic Pathways on the Millimeter Scale in High‑Altitude Modern Stromatolites | 10.1007/s00248-022-02112-7 | 2022 |
| Vibrio fluminensis sp. nov. isolated from the skin of Southern Atlantic sharpnose-pufferfish (Canthigaster figueiredoi) | 10.1007/s00203-022-03266-1 | 2022 |
| Insights on the biochemical and cellular changes induced by heat stress in the Mussismilia braziliensis coral symbiont (Cladocopium) | 10.3389/fmicb.2022.973980 | 2022 |
| A Framework Proposal to Assess the Maturity of Green IT in Organizations | 10.3390/su141912348 | 2022 |
| Seasonal and diel modulation of DOM in a mangrove-dominated estuary | 10.1016/j.scitotenv.2022.159045 | 2022 |
| Fine-Scale Structuring of Planktonic spp. in the Chinese Marginal Seas | 10.1128/aem.01262-22 | 2022 |
| The Great Amazon Reef System: a fact | 10.3389/fmars.2022.1088956 | 2022 |
| Aeromonas allosaccharophila Strain AE59-TE2 Is Highly Antagonistic towards Multidrug-Resistant Human Pathogens, What Does Its Genome Tell Us? | 10.3390/life12101492 | 2022 |
| Editorial: Interaction between Marine Invertebrates and Symbiotic Microbes in a Changing Environment: Community Structure and Ecological Functions | 10.3389/fmars.2022.1128906 | 2022 |
| Brumadinho dam collapse induces changes in the microbiome and the antibiotic resistance of the Paraopeba River (Minas Gerais, Brazil) | 10.1016/j.scitotenv.2022.161278 | 2022 |
| Ecogenomics and metabolic potential of the South Atlantic Ocean microbiome | 10.1016/j.scitotenv.2020.142758 | 2021 |
| A survey of biodiversity informatics: Concepts, practices, and challenges | 10.1002/widm.1394 | 2021 |
| Muricauda brasiliensis sp. nov., isolated from a mat-forming cyanobacterial culture | 10.1007/s42770-020-00400-3 | 2021 |
| Immediate and long-term impacts of one of the worst mining tailing dam failure worldwide (Bento Rodrigues, Minas Gerais, Brazil) | 10.1016/j.scitotenv.2020.143697 | 2021 |
| Genome sequence of Vibrio fluvialis 362.3 isolated from coral Mussismilia braziliensis reveals genes related to marine environment adaptation | 10.1007/s00203-021-02279-6 | 2021 |
| Conserved rhodolith microbiomes across environmental gradients of the Great Amazon Reef | 10.1016/j.scitotenv.2020.143411 | 2021 |
| Insights into the genomic repertoire of Aquimarina litoralis CCMR20, a symbiont of coral Mussismilia braziliensis | 10.1007/s00203-021-02194-w | 2021 |
| Cytogenotoxicity of the water and sediment of the Paraopeba River immediately after the iron ore mining dam disaster (Brumadinho, Minas Gerais, Brazil) | 10.1016/j.scitotenv.2021.145193 | 2021 |
| Temporal Variability of Air-Sea CO flux in the Western Tropical North Atlantic Influenced by the Amazon River Plume | 10.1029/2020GB006798 | 2021 |
| Metagenomic Insights Into Ecosystem Function in the Microbial Mats of a Large Hypersaline Coastal Lagoon System | 10.3389/fmars.2021.715335 | 2021 |
| Rhodolith mobility potential from seasonal and extreme waves | 10.1016/j.csr.2021.104527 | 2021 |
| https://github.com/openjournals/joss-reviews/issues/3622 | 10.5281/zenodo.5550568 | 2021 |
| Risk of Collapse in Water Quality in the Guandu River (Rio de Janeiro, Brazil) | 10.1007/s00248-021-01839-z | 2021 |
| Metals and organic matter baselines in sediments in a cross-shelf gradient at Abrolhos Bank, SW Atlantic | 10.1016/j.scitotenv.2021.149867 | 2021 |
| Breviolum and Cladocopium Are Dominant Among Symbiodiniaceae of the Coral Holobiont Madracis decactis | 10.1007/s00248-021-01868-8 | 2021 |
| Water column and bottom gradients on the continental shelf eastward of the Amazon River mouth and implications for mesophotic reef occurrence | 10.1016/j.jmarsys.2021.103642 | 2021 |
| Microbiome Associated with the Tetrodotoxin-Bearing Anuran Brachycephalus pitanga | 10.1016/j.toxicon.2021.10.002 | 2021 |
| Transcriptome of the coral Mussismilia braziliensis symbiont Sargassococcus simulans | 2021 | |
| New species of Crella (Pytheas) Topsent, 1890 and Crellomima Rezvoi, 1925 (Crellidae, Poecilosclerida, Demospongiae) from Chilean shallow and Argentinean deep waters, with a synthesis on the known phylogenetic relationships of crellid sponges | 10.11646/zootaxa.5052.3.3 | 2021 |
| Mangrove microbiome reveals importance of sulfur metabolism in tropical coastal waters | 10.1016/j.scitotenv.2021.151889 | 2021 |
| Metal concentrations and biological effects from one of the largest mining disasters in the world (Brumadinho, Minas Gerais, Brazil) | 10.1038/s41598-020-62700-w | 2020 |
| Ecogenomics of the Marine Benthic Filamentous Cyanobacterium Adonisia | 10.1007/s00248-019-01480-x | 2020 |
| Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes | 10.1186/s12864-020-6523-2 | 2020 |
| Genome-resolved metagenomics analysis provides insights into the ecological role of Thaumarchaeota in the Amazon River and its plume | 10.1186/s12866-020-1698-x | 2020 |
| A new genomic taxonomy system for the collective | 10.1111/1462-2920.15173 | 2020 |
| Insights on the genetic repertoire of the coral Mussismilia braziliensis endosymbiont Symbiodinium | 10.1007/s13199-020-00664-1 | 2020 |
| Genomic repertoire of Mameliella alba Ep20 associated with Symbiodinium from the endemic coral Mussismilia braziliensis | 10.1007/s13199-019-00655-x | 2020 |
| Genetic diversity and connectivity of Flaccisagitta enflata (Chaetognatha: Sagittidae) in the tropical Atlantic ocean (northeastern Brazil) | 10.1371/journal.pone.0231574 | 2020 |
| Unlocking the Genomic Taxonomy of the Prochlorococcus Collective | 10.1007/s00248-020-01526-5 | 2020 |
| Rapid screening of marine bacterial symbionts using MALDI-TOF MS | 10.1007/s00203-020-01917-9 | 2020 |
| Oil leakage induces changes in deep-sea sediments of Campos Basin (Brazil) | 10.1016/j.scitotenv.2020.139556 | 2020 |
| New bacterial and archaeal lineages discovered in organic rich sediments of a large tropical Bay | 10.1016/j.margen.2020.100789 | 2020 |
| Conserved Pigment Profiles in Phylogenetically Diverse Symbiotic Bacteria Associated with the Corals Montastraea cavernosa and Mussismilia braziliensis | 10.1007/s00248-020-01551-4 | 2020 |
| Glacial-interglacial transitions in microbiomes recorded in deep-sea sediments from the western equatorial Atlantic | 10.1016/j.scitotenv.2020.140904 | 2020 |
| Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire | 10.1007/s00203-020-02019-2 | 2020 |
| Mussismilia braziliensis white plague disease is characterized by a compromised coral immune system and dysbiosis | 10.1007/s00248-020-01588-5 | 2020 |
| Reply to: Caution in inferring viral strategies from abundance correlations in marine metagenomes | 10.1038/s41467-018-08286-4 | 2019 |
| Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection | 10.1038/s41598-019-39406-9 | 2019 |
| Environmental modulation of the proteomic profiles from closely phylogenetically related populations of the red seaweed Plocamium brasiliense | 10.7717/peerj.6469 | 2019 |
| Metagenomics sheds light on the metabolic repertoire of oil-biodegrading microbes of the South Atlantic Ocean | 10.1016/j.envpol.2019.03.007 | 2019 |
| Metagenomic Analysis of the Whole Gut Microbiota in Brazilian Termitidae Termites Cornitermes cumulans, Cyrilliotermes strictinasus, Syntermes dirus, Nasutitermes jaraguae, Nasutitermes aquilinus, Grigiotermes bequaerti, and Orthognathotermes mirim | 10.1007/s00284-019-01662-3 | 2019 |
| Halomonas coralii sp. nov. Isolated from Mussismilia braziliensis | 10.1007/s00284-019-01674-z | 2019 |
| Modelling the influence of environmental parameters over marine planktonic microbial communities using artificial neural networks | 10.1016/j.scitotenv.2019.04.009 | 2019 |
| Genomic basis of antibiotic resistance in Vibrio parahaemolyticus strain JPA1 | 10.1590/0074-02760190053 | 2019 |
| Light availability for reef-building organisms in a plume-influenced shelf | 10.1016/j.csr.2019.05.005 | 2019 |
| Transcriptomic analysis of clam extrapallial fluids reveals immunity and cytoskeleton alterations in the first week of Brown Ring Disease development | 10.1016/j.fsi.2019.08.025 | 2019 |
| Remote sensing, isotopic composition and metagenomics analyses revealed Doce River ore plume reached the southern Abrolhos Bank Reefs | 10.1016/j.scitotenv.2019.134038 | 2019 |
| Repeated selective enrichment process of sediment microbiota occurred in sea cucumber guts | 10.1111/1758-2229.12791 | 2019 |
| [PROVISIONAL] Genome sequence of Shewanella corallii strain A687 isolated from pufferfish (Sphoeroides spengleri) | 10.1590/1678-4685-gmb-2018-0314 | 2019 |
| The role of sedimentation in the structuring of microbial communities in biofloc-dominated aquaculture tanks | 10.1016/j.aquaculture.2019.734493 | 2019 |
| Insights on the evolution of the living Great Amazon Reef System, equatorial West Atlantic | 10.1038/s41598-019-50245-6 | 2019 |
| Enterovibrio baiacu sp. nov. | 10.1007/s00284-019-01785-7 | 2019 |
| New tetrodotoxin analogs in Brazilian pufferfishes tissues and microbiome | 10.1016/j.chemosphere.2019.125211 | 2019 |
| Severe impacts of the Brumadinho dam failure (Minas Gerais, Brazil) on the water quality of the Paraopeba River | 10.1016/j.scitotenv.2019.135914 | 2019 |
| Vibrio taketomensis sp. nov. by genome taxonomy | 10.1016/j.syapm.2019.126048 | 2019 |
| - Candidatus Colwellia aromaticivorans- sp. nov., - Candidatus Halocyntiibacter alkanivorans- sp. nov., and - Candidatus Ulvibacter alkanivorans- sp. nov. Genome Sequences | 10.1128/mra.00086-19 | 2019 |
| Occurrence of Harmful Cyanobacteria in Drinking Water from a Severely Drought-Impacted Semi-arid Region | 10.3389/fmicb.2018.00176 | 2018 |
| Zooplankton From a Reef System Under the Influence of the Amazon River Plume | 10.3389/fmicb.2018.00355 | 2018 |
| Genomic Attributes of Novel Symbiont Pseudovibrio brasiliensis sp. nov. Isolated From the Sponge Arenosclera brasiliensis | 10.3389/fmars.2018.00081 | 2018 |
| Vibrio tapetis Displays an Original Type IV Secretion System in Strains Pathogenic for Bivalve Molluscs | 10.3389/fmicb.2018.00227 | 2018 |
| Microbial and Functional Biodiversity Patterns in Sponges that Accumulate Bromopyrrole Alkaloids Suggest Horizontal Gene Transfer of Halogenase Genes | 10.1007/s00248-018-1172-6 | 2018 |
| Description of Alteromonas abrolhosensis sp. nov., isolated from sea water of Abrolhos Bank, Brazil | 10.1007/s10482-018-1016-x | 2018 |
| Perspectives on the Great Amazon Reef: Extension, Biodiversity, and Threats | 10.3389/fmars.2018.00142 | 2018 |
| Rapid isolation of culturable microalgae from a tropical shallow lake system | 10.1007/s10811-018-1404-7 | 2018 |
| International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Aeromonadaceae, Vibrionaceae and related organisms Minutes of the meeting, 13 November 2017, Chicago, USA | 10.1099/ijsem.0.002815 | 2018 |
| An observational clinical case of Zika virus-associated neurological disease is associated with primary IgG response and enhanced TNF levels | 10.1099/jgv.0.001080 | 2018 |
| Draft Genome Sequence of sp. Strain K001 Isolated from a Marine Cyanobacterial Culture | 10.1128/genomeA.00451-18 | 2018 |
| Metagenomics Sheds Light on the Ecology of Marine Microbes and Their Viruses | 10.1016/j.tim.2018.05.015 | 2018 |
| Marine Biotechnology in Brazil: Recent Developments and Its Potential for Innovation | 10.3389/fmars.2018.00236 | 2018 |
| Summer micro- and mesozooplankton from the largest reef system of the South Atlantic Ocean (Abrolhos, Brazil): Responses to coast proximity | 10.1016/j.seares.2018.08.002 | 2018 |
| Atlantic Forest loss caused by the world´s largest tailing dam collapse (Fundão Dam, Mariana, Brazil) | 10.1016/j.rsase.2018.08.003 | 2018 |
| Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification | 10.1186/s12864-018-5064-4 | 2018 |
| Metagenomics of Coral Reefs Under Phase Shift and High Hydrodynamics | 10.3389/fmicb.2018.02203 | 2018 |
| Inhibitory effect of microalgae and cyanobacteria extracts on influenza virus replication and neuraminidase activity | 10.7717/peerj.5716 | 2018 |
| Environmental conditions affect activity and associated microorganisms of marine sponges | 10.1016/j.marenvres.2018.09.020 | 2018 |
| Insights on the freshwater microbiomes metabolic changes associated with the world's largest mining disaster | 10.1016/j.scitotenv.2018.11.112 | 2018 |
| Genome Sequences of sp. nov. and sp. nov., Isolated from Rhodoliths | 10.1128/MRA.01039-18 | 2018 |
| The clinically approved antiviral drug sofosbuvir inhibits Zika virus replication | 10.1038/srep40920 | 2017 |
| Pregnant women carrying microcephaly foetuses and Zika virus contain potentially pathogenic microbes and parasites in their amniotic fluid | 10.1186/s12920-016-0242-1 | 2017 |
| Diversity of Microbial Carbohydrate-Active enZYmes (CAZYmes) Associated with Freshwater and Soil Samples from Caatinga Biome | 10.1007/s00248-016-0911-9 | 2017 |
| Cultures of the Marine Bacterium Pseudovibrio denitrificans Ab134 Produce Bromotyrosine-Derived Alkaloids Previously Only Isolated from Marine Sponges | 10.1021/acs.jnatprod.6b00838 | 2017 |
| Bacterial interactions and implications for oil biodegradation process in mangrove sediments | 10.1016/j.marpolbul.2017.02.052 | 2017 |
| Modeling abundance, growth, and health of the solitary coral Scolymia wellsi (Mussidae) in turbid SW Atlantic coral reefs | 10.1007/s00227-017-3090-4 | 2017 |
| DEVELOPMENT OF STANDARD METHODS FOR ZIKA VIRUS PROPAGATION, TITRATION, AND PURIFICATION | 10.1016/j.jviromet.2017.04.011 | 2017 |
| Virioplankton dynamics are related to eutrophication levels in a tropical urbanized bay | 10.1371/journal.pone.0174653 | 2017 |
| Draft Genome Sequence of Pseudoalteromonas sp. Strain PAB 2.2 Isolated from Abrolhos Bank (Brazil) | 10.1128/genomea.00016-17 | 2017 |
| Thaumasiovibrio occultus gen. nov. sp. nov. and Thaumasiovibrio subtropicus sp. nov. within the family Vibrionaceae , isolated from coral reef seawater off Ishigaki Island, Japan | 10.1016/j.syapm.2017.04.003 | 2017 |
| Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans | 10.1038/ncomms15955 | 2017 |
| The Deep-Sea Microbial Community from the Amazonian Basin Associated with Oil Degradation | 10.3389/fmicb.2017.01019 | 2017 |
| Aura-biomes are present in the water layer above coral reef benthic macro-organisms | 10.7717/peerj.3666 | 2017 |
| Unlocking Marine Biotechnology in the Developing World | 10.1016/j.tibtech.2017.08.005 | 2017 |
| Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle | 10.3389/fmicb.2017.00784 | 2017 |
| Integrative Taxonomy of Amazon Reefs' Arenosclera spp.: A New Clade in the Haplosclerida (Demospongiae) | 10.3389/fmars.2017.00291 | 2017 |
| Quantitative Detection of Active Vibrios Associated with White Plague Disease in Mussismilia braziliensis Corals | 10.3389/fmicb.2017.02272 | 2017 |
| Ecogenomics and Taxonomy of Cyanobacteria Phylum | 10.3389/fmicb.2017.02132 | 2017 |
| Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes | 10.1186/s12864-017-4294-1 | 2017 |
| Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon | 10.1128/msphere.00366-17 | 2017 |
| Molecular Mechanisms for Microbe Recognition and Defense by the Red Seaweed | 10.1128/mSphere.00094-17 | 2017 |
| Mercury speciation and Hg stable isotope ratios in sediments from Amazon floodplain lakes-Brazil | 10.1002/lno.10758 | 2017 |
| Microbial processes driving coral reef organic carbon flow | 10.1093/femsre/fux018 | 2017 |
| Comparative genomics of and proposal of the new genus | 10.7717/peerj.1522 | 2016 |
| An environmental overview of Guanabara Bay, Rio de Janeiro | 10.1016/j.rsma.2016.01.009 | 2016 |
| Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome | 10.1371/journal.pone.0148296 | 2016 |
| Detection and sequencing of Zika virus from amniotic fluid of fetuses with microcephaly in Brazil: a case study | 10.1016/s1473-3099(16)00095-5 | 2016 |
| Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps | 10.1038/srep21631 | 2016 |
| Lytic to temperate switching of viral communities | 10.1038/nature17193 | 2016 |
| Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach | 10.1007/s10482-016-0649-x | 2016 |
| An extensive reef system at the Amazon River mouth | 10.1126/sciadv.1501252 | 2016 |
| Carbonate Production by Benthic Communities on Shallow Coralgal Reefs of Abrolhos Bank, Brazil | 10.1371/journal.pone.0154417 | 2016 |
| Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan | 10.1016/j.syapm.2016.04.002 | 2016 |
| Multi-Locus Sequence Analysis of the close relatives and | 10.1128/AEM.00620-16 | 2016 |
| Proposal of fifteen new species of Parasynechococcus based on genomic, physiological and ecological features | 10.1007/s00203-016-1256-y | 2016 |
| Metaproteomics reveals metabolic transitions between healthy and diseased stony coral | 10.1111/mec.13775 | 2016 |
| The First Temporal and Spatial Assessment of Vibrio Diversity of the Surrounding Seawater of Coral Reefs in Ishigaki, Japan | 10.3389/fmicb.2016.01185 | 2016 |
| Taxonomic and Functional Metagenomic Signature of Turfs in the Abrolhos Reef System (Brazil) | 2016 | |
| Cloning and Functional Characterization of Cycloartenol Synthase from the Red Seaweed Laurencia dendroidea | 10.1371/journal.pone.0165954 | 2016 |
| Microbial community diversity and physical-chemical features of the Southwestern Atlantic Ocean | 10.1007/s00203-014-1035-6 | 2015 |
| COMMUNITY STRUCTURE OF THE TINTINNIDS (CILIOPHORA: SPIROTRICHEA) IN THE REGION OF ABROLHOS (BAHIA, BRAZIL) | 10.1590/s1679-87592015075206301 | 2015 |
| Multiple Symbiodinium Strains Are Hosted by the Brazilian Endemic Corals Mussismilia spp. | 10.1007/s00248-015-0573-z | 2015 |
| New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) | 10.3390/md13020879 | 2015 |
| Diversity and ecological structure of vibrios in benthic and pelagic habitats along a latitudinal gradient in the Southwest Atlantic Ocean | 10.7717/peerj.741 | 2015 |
| Physical Forcing Mechanisms Controlling the Variability of Chlorophyll-a over the Royal-Charlotte and Abrolhos Banks-Eastern Brazilian Shelf | 10.1371/journal.pone.0117082 | 2015 |
| Finding diagnostic phenotypic features of Photobacterium in the genome sequences | 10.1007/s10482-015-0414-6 | 2015 |
| Microbial and sponge loops modify fish production in phase-shifting coral reefs | 10.1111/1462-2920.12851 | 2015 |
| Potential metabolic strategies of widely-distributed holobionts in the oceanic archipelago of St Peter and St Paul (Brazil) | 10.1093/femsec/fiv043 | 2015 |
| Draft Genome Sequence of Micrococcus sp. Strain MS-AsIII-49, an Arsenate-Reducing Isolate from Tropical Metal-Rich Sediment | 10.1128/genomea.00122-15 | 2015 |
| Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review | 10.7717/peerj.1008 | 2015 |
| Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data | 10.1371/journal.pone.0130084 | 2015 |
| Use of a Marine Microbial Community as Inoculum for Biomethane Production | 10.1080/09593330.2015.1069900 | 2015 |
| Insights into the Microbial and Viral Dynamics of a Coastal Downwelling-Upwelling Transition | 10.1371/journal.pone.0137090 | 2015 |
| Advanced Microbial Taxonomy Combined with Genome-Based-Approaches Reveals that Vibrio astriarenae sp. nov., an Agarolytic Marine Bacterium, Forms a New Clade in Vibrionaceae | 10.1371/journal.pone.0136279 | 2015 |
| BaMBa: towards the integrated management of Brazilian marine environmental data | 10.1093/database/bav088 | 2015 |
| Mesophotic reef fish assemblages of the remote St. Peter and St. Paul?s Archipelago, Mid-Atlantic Ridge, Brazil | 10.1007/s00338-015-1368-x | 2015 |
| Turbulence-driven shifts in holobionts and planktonic microbial assemblages in St. Peter and St. Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.3389/fmicb.2015.01038 | 2015 |
| Insights from genome of Clostridium butyricum INCQS635 reveal mechanisms to convert complex sugars for biofuel production | 10.1007/s00203-015-1166-4 | 2015 |
| Environmental and Sanitary Conditions of Guanabara Bay, Rio de Janeiro | 10.3389/fmicb.2015.01232 | 2015 |
| Culturable Heterotrophic Bacteria Associated with Healthy and Bleached Scleractinian Madracis decactis and the Fireworm Hermodice carunculata from the Remote St. Peter and St. Paul Archipelago, Brazil | 10.1007/s00284-013-0435-1 | 2014 |
| Genotype to phenotype: identification of diagnostic vibrio phenotypes using whole genome sequences | 10.1099/ijs.0.057927-0 | 2014 |
| Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.7717/peerj.427 | 2014 |
| Vibrio madracius sp. nov. Isolated from Madracis decactis (Scleractinia) in St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.1007/s00284-014-0600-1 | 2014 |
| Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake | 10.1186/1471-2164-15-473 | 2014 |
| Diversity and antimicrobial potential of culturable heterotrophic bacteria associated with the endemic marine sponge Arenosclera brasiliensis | 10.7717/peerj.419 | 2014 |
| Cholesterol depletion induces transcriptional changes during skeletal muscle differentiation | 10.1186/1471-2164-15-544 | 2014 |
| Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions | 10.1186/1471-2164-15-654 | 2014 |
| A survey on cultivable heterotrophic bacteria inhabiting a thermally unstratified water column in an Atlantic Rainforest lake | 10.7717/peerj.478 | 2014 |
| Microbiota of the Major South Atlantic Reef Building Coral Mussismilia | 10.1007/s00248-014-0474-6 | 2014 |
| Oenococcus alcoholitolerans sp. nov., a lactic acid bacteria isolated from cachaça and ethanol fermentation processes | 10.1007/s10482-014-0296-z | 2014 |
| Draft Genome Sequences of Marine Flavobacterium Algibacter lectus Strains SS8 and NR4 | 10.1128/genomeA.01168-14 | 2014 |
| Exploring the Genome of Cheese Starter Lactic Acid Bacterium Lactococcus lactis subsp. lactis CECT 4433 | 10.1128/genomeA.01142-14 | 2014 |
| Exploring the Genome of a Butyric Acid Producer, Clostridium butyricum INCQS635 | 10.1128/genomea.01169-14 | 2014 |
| Draft Genome Sequence of Marine Flavobacterium Jejuia pallidilutea Strain 11shimoA1 and Pigmentation Mutants | 10.1128/genomeA.01236-14 | 2014 |
| Draft Genome Sequences of Marine Flavobacterium Nonlabens Strains NR17, NR24, NR27, NR32, NR33, and Ara13 | 10.1128/genomeA.01165-14 | 2014 |
| Draft Genome Sequences of Two Vibrionaceae Species, Vibrio ponticus C121 and Photobacterium aphoticum C119, Isolated as Coral Reef Microbiota | 10.1128/genomeA.01095-14 | 2014 |
| Microbial taxonomy in the post-genomic era: Rebuilding from scratch? | 10.1007/s00203-014-1071-2 | 2014 |
| Dynamics of Coral Reef Benthic Assemblages of the Abrolhos Bank, Eastern Brazil: Inferences on Natural and Anthropogenic Drivers | 10.1371/journal.pone.0054260 | 2013 |
| Spatial patterns of benthic megahabitats and conservation planning in the Abrolhos Bank | 10.1016/j.csr.2013.04.036 | 2013 |
| Buracas: Novel and unusual sinkhole-like features in the Abrolhos Bank | 10.1016/j.csr.2013.04.035 | 2013 |
| Traffic of Secondary Metabolites to Cell Surface in the Red Alga Laurencia dendroidea Depends on a Two-Step Transport by the Cytoskeleton | 10.1371/journal.pone.0063929 | 2013 |
| Bacterial communities associated with three Brazilian endemic reef corals (Mussismilia spp.) in a coastal reef of the Abrolhos shelf | 10.1016/j.csr.2013.05.009 | 2013 |
| Genomic Taxonomy of the Genus Prochlorococcus | 10.1007/s00248-013-0270-8 | 2013 |
| Biological oxygen demand optode analysis of coral reef-associated microbial communities exposed to algal exudates | 10.7717/peerj.107 | 2013 |
| Microbial genomic taxonomy | 10.1186/1471-2164-14-913 | 2013 |
| Updating the Vibrio clades defined by multilocus sequence phylogeny: proposal of eight new clades, and the description of Vibrio tritonius sp. nov. | 10.3389/fmicb.2013.00414 | 2013 |
| Metagenomic Analysis of Healthy and White Plague-Affected Mussismilia braziliensis Corals | 10.1007/s00248-012-0161-4 | 2013 |
| Physiologic and metagenomic attributes of the rhodoliths forming the largest CaCO3 bed in the South Atlantic Ocean | 10.1038/ismej.2013.133 | 2013 |
| Sinkhole-like structures as bioproductivity hotspots in the Abrolhos Bank | 10.1016/j.csr.2013.05.011 | 2013 |
| Influence of light intensity on biofilm formation and the performance of pink shrimp Farfantepenaeus paulensis juveniles reared in cages | 10.1111/j.1365-2109.2011.02878.x | 2012 |
| Genome Sequence of the Marine Bacterium Vibrio campbellii DS40M4, Isolated from Open Ocean Water | 10.1128/jb.06583-11 | 2012 |
| Structuring of Bacterioplankton Diversity in a Large Tropical Bay | 10.1371/journal.pone.0031408 | 2012 |
| Vibrio alfacsensis sp. nov., isolated from marine organisms | 10.1099/ijs.0.033191-0 | 2012 |
| Rhodolith Beds Are Major CaCO3 Bio-Factories in the Tropical South West Atlantic | 10.1371/journal.pone.0035171 | 2012 |
| Genome Sequence of the Bacterioplanktonic, Mixotrophic Vibrio campbellii Strain PEL22A, Isolated in the Abrolhos Bank | 10.1128/jb.00377-12 | 2012 |
| Abrolhos Bank Reef Health Evaluated by Means of Water Quality, Microbial Diversity, Benthic Cover, and Fish Biomass Data | 10.1371/journal.pone.0036687 | 2012 |
| Taxonomic and Functional Microbial Signatures of the Endemic Marine Sponge Arenosclera brasiliensis | 10.1371/journal.pone.0039905 | 2012 |
| Transcriptomic analysis of the red seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) and its microbiome | 10.1186/1471-2164-13-487 | 2012 |
| Polyketide synthase gene diversity within the endemic sponge Arenosclera brasiliensis microbiome | 10.1128/aem.03354-12 | 2012 |
| Genome Sequences of the Ethanol-Tolerant Lactobacillus vini Strains LMG 23202T and JP7.8.9 | 10.1128/JB.00446-12 | 2012 |
| Marinomonas brasilensis sp. nov., isolated from the coral Mussismilia hispida, and reclassification of Marinomonas basaltis as a later heterotypic synonym of Marinomonas communis | 10.1099/ijs.0.024661-0 | 2011 |
| Coastal bacterioplankton community diversity along a latitudinal gradient in Latin America by means of V6 tag pyrosequencing | 10.1007/s00203-010-0644-y | 2011 |
| Effect of N-Acetyl-D-Glucosamine on Gene Expression in Vibrio parahaemolyticus | 10.1264/jsme2.me10152 | 2011 |
| Genomic and proteomic analyses of the coral pathogen Vibrio coralliilyticus reveal a diverse virulence repertoire | 10.1038/ismej.2011.19 | 2011 |
| The genus Listonella MacDonell and Colwell 1986 is a later heterotypic synonym of the genus Vibrio Pacini 1854 (Approved Lists 1980) - a taxonomic opinion | 10.1099/ijs.0.030015-0 | 2011 |
| Complete Genome Sequence of the Marine Fish Pathogen Vibrio anguillarum Harboring the pJM1 Virulence Plasmid and Genomic Comparison with Other Virulent Strains of V. anguillarum and V. ordalii | 10.1128/iai.05138-11 | 2011 |
| An MLSA-based online scheme for rapid identification of Stenotrophomonas isolates. | 2011 | |
| Reclassification of Rhizobium tropici type A strains as Rhizobium leucaenae sp. nov. | 10.1099/ijs.0.032912-0 | 2011 |
| Towards a genome based taxonomy of Mycoplasmas | 10.1016/j.meegid.2011.07.020 | 2011 |
| Genome Sequence of the Human Pathogen Vibrio cholerae Amazonia | 10.1128/JB.05643-11 | 2011 |
| Vibrio jasicida sp. nov., a member of the Harveyi clade, from marine animals (packhorse lobster, abalone, and Atlantic salmon) | 10.1099/ijs.0.025916-0 | 2011 |
| Vibrio variabilis sp. nov. and Vibrio maritimus sp. nov., isolated from Palythoa caribaeorum | 10.1099/ijs.0.026997-0 | 2011 |
| Quorum sensing signal production and inhibition by coral-associated vibrios | 10.1111/j.1758-2229.2009.00122.x | 2010 |
| Bacterial Community Associated with Healthy and Diseased Reef Coral Mussismilia hispida from Eastern Brazil | 10.1007/s00248-010-9646-1 | 2010 |
| Marinobacterium coralli sp. nov., isolated from coral mucus (Mussismilia hispida) | 10.1099/ijs.0.021105-0 | 2010 |
| Vibrio communis sp. nov. isolated from marine animals (Mussismilia hispida, Phyllogorgia dilatata, Palythoa caribaeorum, Palythoa variabilis and Litopenaeus vannamei) | 10.1099/ijs.0.019729-0 | 2010 |
| Photobacterium swingsii sp. nov. isolated from marine organisms | 10.1099/ijs.0.019687-0 | 2010 |
| Photobacterium jeanii sp. nov., isolated from corals and zoanthids | 10.1099/ijs.0.019968-0 | 2010 |
| Identification of non-coding RNAs in environmental vibrios | 10.1099/mic.0.039149-0 | 2010 |
| Screening for endophytic nitrogen-fixing bacteria in Brazilian sugarcane varieties used in organic farming and description of Stenotrophomonas pavanii sp. nov. | 10.1099/ijs.0.019372-0 | 2010 |
| Seasonal prevalence of white plague like disease on the endemic Brazilian reef coral Mussismilia braziliensis | 10.3856/vol38-issue2-fulltext-16 | 2010 |
| Pesquisa nos Oceanos: desafios e oportunidades | 2010 | |
| Vibrio2009: the third international conference on the biology of Vibrios | 10.1111/j.1365-2958.2010.07286.x | 2010 |
| Bacterial Community Diversity in the Brazilian Atlantic Forest Soils | 10.1007/s00248-010-9750-2 | 2010 |
| Usefulness of a real time PCR platform for GC content and DNA-DNA hybridization similarity estimations in vibrios | 10.1099/ijs.0.023606-0 | 2010 |
| Diversity of lactic acid bacteria of the bioethanol process | 10.1186/1471-2180-10-298 | 2010 |
| Bacterial diversity associated with the Brazilian endemic reef coral | 10.1111/j.1365-2672.2008.04106.x | 2009 |
| Genomic diversity of vibrios associated with the Brazilian coral Mussismilia hispida and its sympatric zoanthids ( Palythoa caribaeorum , Palythoa variabilis and Zoanthus solanderi ) | 10.1111/j.1365-2672.2009.04149.x | 2009 |
| Multilocus sequence analysis of Brazilian Rhizobium strains microsymbionts of common bean (Phaseolus vulgaris L.) reveals unexpected taxonomic diversity | 10.1016/j.resmic.2009.03.009 | 2009 |
| Diversity and pathogenic potential of vibrios isolated from Abrolhos Bank corals | 10.1111/j.1758-2229.2009.00101.x | 2009 |
| Comparative genomic analyses identify the Vibrio harveyi genome sequenced strains BAA-1116 and HY01 as Vibrio campbellii | 10.1111/j.1758-2229.2009.00100.x | 2009 |
| Genomic taxonomy of Vibrios | 10.1186/1471-2148-9-258 | 2009 |
| Mutation is the Main Driving Force in the Diversification of the Vibrio splendidus Clade | 10.1264/jsme2.ME09128 | 2009 |
| Ecological diversification in the Bacillus cereus Group | 10.1111/j.1462-2920.2007.01495.x | 2008 |
| Identification of Vibrio cholerae and Vibrio mimicus by multilocus sequence analysis (MLSA) | 10.1099/ijs.0.65461-0 | 2008 |
| Diseases leading to accelerated decline of reef corals in the largest South Atlantic reef complex (Abrolhos Bank, eastern Brazil) | 10.1016/j.marpolbul.2008.02.013 | 2008 |
| The core group induces yellow band disease in Caribbean and Indo-Pacific reef-building corals | 10.1111/j.1365-2672.2008.03871.x | 2008 |
| Vibrios dominate as culturable nitrogen-fixing bacteria of the Brazilian coral Mussismilia hispida | 10.1016/j.syapm.2008.06.001 | 2008 |
| Diversity of Vibrios associated with reared clams in Galicia (NW Spain) | 10.1016/j.syapm.2008.04.001 | 2008 |
| Sneathiella chinensis gen. nov., sp. nov., a novel marine alphaproteobacterium isolated from coastal sediment in Qingdao, China | 10.1099/ijs.0.64478-0 | 2007 |
| Multilocus Sequence Analysis Reveals that Vibrio harveyi and V. campbellii Are Distinct Species | 10.1128/aem.00020-07 | 2007 |
| Phylogenetic analysis of vibrios and related species by means of atpA gene sequences | 10.1099/ijs.0.65223-0 | 2007 |
| Photobacterium kishitanii sp. nov., a luminous marine bacterium symbiotic with deep-sea fishes | 10.1099/ijs.0.65153-0 | 2007 |
| Inferring the Evolutionary History of Vibrios by Means of Multilocus Sequence Analysis | 10.1128/jb.00693-07 | 2007 |
| Thalassomonas loyana sp. nov., a causative agent of the white plague-like disease of corals on the Eilat coral reef | 10.1099/ijs.0.63800-0 | 2006 |
| Vibrio2005: the First International Conference on the Biology of Vibrios | 10.1128/jb.00141-06 | 2006 |
| Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching | 10.1099/ijs.0.63370-0 | 2005 |
| Vibrio gigantis sp. nov., isolated from the hemolymph of reared oysters (Crassostrea gigas) | 2005 | |
| Application of Multilocus sequence analysis (MLSA) for rapid Identification of Enterococcus Species based on rpoA and pheS genes | 2005 | |
| Phylogeny and Molecular Identification of Vibrios on the Basis of Multilocus Sequence Analysis | 10.1128/aem.71.9.5107-5115.2005 | 2005 |
| Pathogenicity of vibrios to rainbow trout (Oncorhynchus mykiss, Walbaum) and Artemia nauplii | 10.1111/j.1462-2920.2005.00847.x | 2005 |
| Opinion: Re-evaluating prokaryotic species | 10.1038/nrmicro1236 | 2005 |
| Do nematode mucus secretions affect bacterial growth? | 10.3354/ame040077 | 2005 |
| Phylogeny and Identification of Enterococci by atpA Gene Sequence Analysis | 10.1128/jcm.43.5.2224-2230.2005 | 2005 |
| Selection of probiotic bacteria and study of their immunostimulatory effect in Penaeus vannamei | 2004 | |
| Molecular identification of V. harveyi?related isolates associated with diseased aquatic organisms | 2004 | |
| Vibrio gallicus sp. nov., isolated from the gut of French abalone Haliotis tuberculata | 2004 | |
| Vibrio hispanicus sp. nov., isolated from Artemia sp. and seawater in Spain | 2004 | |
| Use of recA as an alternative phylogenetic marker in the family Vibrionaceae | 2004 | |
| Biodiversity of Vibrios | 10.1128/mmbr.68.3.403-431.2004 | 2004 |
| Sliding window discretization: a new method for the multiple band matching of bacterial genotyping fingerprints | 2004 | |
| Applicatin of Sliding Window Discretization and Minimization of Stochastic Complexity for the Analysis of FAFLP Genotyping Fingerprint Patterns of Vibrionaceae | 2004 | |
| Vibrio crassostreae sp. nov., isolated from the haemolymph of oysters (Crassostreae gigas) | 2004 | |
| Vibrio neonatus sp. nov. and Vibrio ezurae sp. nov. Isolated from the Gut of Japanese Abalones | 10.1078/0723202041748154 | 2004 |
| Reclassification of Vibrio hollisae as Grimontia hollisae gen. nov., comb. nov. | 10.1099/ijs.0.02660-0 | 2003 |
| Genomic Diversity of Clinical and Environmental Vibrio cholerae Strains Isolated in Brazil between 1991 and 2001 as Revealed by Fluorescent Amplified Fragment Length Polymorphism Analysis | 10.1128/jcm.41.5.1946-1950.2003 | 2003 |
| Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis | 2003 | |
| Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis | 2003 | |
| Vibrio superstes sp. nov., isolated from the gut of Australian abalones Haliotis laevigata and Haliotis rubra | 2003 | |
| Phenotypic diversity amongst Vibrio strains from marine aquaculture systems | 2003 | |
| Vibrio pacinii sp. nov., from cultured aquatic organisms | 2003 | |
| Vibrio tasmaniensis sp. nov., isolated from Atlantic Salmon (Salmo salar L.) | 10.1078/072320203322337326 | 2003 |
| Vibrio fortis sp. nov. and Vibrio hepatarius sp. nov., isolated from aquatic animals and the marine environment | 10.1099/ijs.0.02658-0 | 2003 |
| Vibrio kanaloae sp. nov., Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals | 10.1099/ijs.0.02490-0 | 2003 |
| Vibrio neptunius sp. nov., Vibrio brasiliensis sp. nov. and Vibrio xuii sp. nov., isolated from the marine aquaculture environment (bivalves, fish, rotifers and shrimps) | 10.1099/ijs.0.02447-0 | 2003 |
| Vibrio trachuri Iwamoto et al. 1995 is a junior synonym of Vibrio harveyi (Johnson and Shunk 1936) Baumann et al. 1981 | 10.1099/ijs.0.02046-0 | 2002 |
| Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae | 10.1099/ijs.0.02315-0 | 2002 |
| Importance of biofilm for water quality and nourishment in intensive shrimp culture | 10.1016/s0044-8486(01)00642-1 | 2002 |
| Fluorescent Amplified Fragment Length Polymorphism and Repetitive Extragenic Palindrome-PCR Fingerprinting Reveal Host-Specific Genetic Diversity of Vibrio halioticoli-Like Strains Isolated from the Gut of Japanese Abalone | 10.1128/aem.68.8.4140-4144.2002 | 2002 |
| New Methods for the Analysis of Binarized BIOLOG GN Data of Vibrio species: Minimization of Stochastic Complexity and Cumulative Classification | 10.1078/0723-2020-00109 | 2002 |
| Genomic Diversity Amongst Vibrio Isolates from Different Sources Determined by Fluorescent Amplified Fragment Length Polymorphism | 10.1078/0723-2020-00067 | 2001 |
| The Coral Bleaching Vibrio shiloi Kushmaro et al. 2001 is a Later Synonym of Vibrio mediterranei Pujalte and Garay 1986 | 10.1078/0723-2020-00065 | 2001 |
| The use of microorganisms as food source for Penaeus paulensis larvae | 10.1016/s0044-8486(98)00511-0 | 1999 |
| Poluição orgânica e condições sanitárias das águas próximas à cidade do Rio Grande-RS, Brasil (Verão de 1996) | 1997 |
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