Cristiane Carneiro Thompson
Instituição:
Universidade Federal do Rio de Janeiro
Centro:
Centro de Ciências da Saúde
Unidade:
Instituto de Biologia
Departamento:
Departamento de Genética/IB
Formação:
-
Fundação Oswaldo Cruz
| Pós-Doutorado | 2009 - 2013
-
Universidade Federal do Rio de Janeiro
Ciências Biológicas (Genética) | Doutorado | 2006 - 2009
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Ghent University
Applied Microbial Systematics | Mestrado | 2002 - 2003
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Universidade Federal do Rio Grande
Geografia | Graduação | 1996 - 1999
Laboratórios:
Nuvens de Palavras:
Artigos:
(92.81% artigos com DOI)
| Titulo | DOI | Ano |
|---|---|---|
| Brumadinho dam collapse induces changes in the microbiome and the antibiotic resistance of the Paraopeba River (Minas Gerais, Brazil) | 10.1016/j.scitotenv.2022.161278 | 2023 |
| Diversity of Microbiomes Across a 13,000-Year-Old Amazon Sediment | 10.1007/s00248-023-02202-0 | 2023 |
| Metagenomic and isotopic signatures of the Amazon River plume into the southern red snapper fish (Lutjanus purpureus) | 10.1016/j.ecss.2023.108440 | 2023 |
| Genome-resolved metagenomic analysis of Great Amazon Reef System sponge-associated Latescibacterota bacteria and their potential contributions to the host sponge and reef | 10.3389/frmbi.2023.1206961 | 2023 |
| Microbiome diversity from sponges biogeographically distributed between South America and Antarctica | 10.1016/j.scitotenv.2023.163256 | 2023 |
| Transcriptome of the coral Mussismilia braziliensis symbiont Sargassococcus simulans | 10.1016/j.margen.2021.100912 | 2022 |
| Letter to Microbial Ecology | 10.1007/s00248-022-02017-5 | 2022 |
| Insights on the biochemical and cellular changes induced by heat stress in the Cladocopium isolated from coral Mussismilia braziliensis | 10.3389/fmicb.2022.973980 | 2022 |
| Fluxes of the Amazon River plume nutrients and microbes into marine sponges | 10.1016/j.scitotenv.2022.157474 | 2022 |
| Vibrio fluminensis sp. nov. isolated from the skin of Southern Atlantic sharpnose-pufferfish (Canthigaster figueiredoi) | 10.1007/s00203-022-03266-1 | 2022 |
| Genome sequence of Vibrio fluvialis 362.3 isolated from coral Mussismilia braziliensis reveals genes related to marine environment adaptation | 10.1007/s00203-021-02279-6 | 2021 |
| Risk of Collapse in Water Quality in the Guandu River (Rio de Janeiro, Brazil) | 10.1007/s00248-021-01839-z | 2021 |
| Metagenomic Insights Into Ecosystem Function in the Microbial Mats of a Large Hypersaline Coastal Lagoon System | 10.3389/fmars.2021.715335 | 2021 |
| Insights into the genomic repertoire of Aquimarina litoralis CCMR20, a symbiont of coral Mussismilia braziliensis | 10.1007/s00203-021-02194-w | 2021 |
| Water column and bottom gradients on the continental shelf eastward of the Amazon River mouth and implications for mesophotic reef occurrence | 10.1016/j.jmarsys.2021.103642 | 2021 |
| Microbiome Associated with the Tetrodotoxin-Bearing Anuran Brachycephalus pitanga | 10.1016/j.toxicon.2021.10.002 | 2021 |
| Breviolum and Cladocopium Are Dominant Among Symbiodiniaceae of the Coral Holobiont Madracis decactis | 10.1007/s00248-021-01868-8 | 2021 |
| Mangrove microbiome reveals importance of sulfur metabolism in tropical coastal waters | 10.1016/j.scitotenv.2021.151889 | 2021 |
| New tetrodotoxin analogs in Brazilian pufferfishes tissues and microbiome | 10.1016/j.chemosphere.2019.125211 | 2020 |
| Ecogenomics of the Marine Benthic Filamentous Cyanobacterium Adonisia | 10.1007/s00248-019-01480-x | 2020 |
| Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes | 10.1186/s12864-020-6523-2 | 2020 |
| Genome sequence of Shewanella corallii strain A687 isolated from pufferfish (Sphoeroides spengleri) | 10.1590/1678-4685-gmb-2018-0314 | 2020 |
| New bacterial and archaeal lineages discovered in organic rich sediments of a large tropical Bay | 10.1016/j.margen.2020.100789 | 2020 |
| Rapid screening of marine bacterial symbionts using MALDI-TOF MS | 10.1007/s00203-020-01917-9 | 2020 |
| Oil leakage induces changes in microbiomes of deep-sea sediments of Campos Basin (Brazil) | 10.1016/j.scitotenv.2020.139556 | 2020 |
| Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire | 10.1007/s00203-020-02019-2 | 2020 |
| A new genomic taxonomy system for the Synechococcus collective | 10.1111/1462-2920.15173 | 2020 |
| Unlocking the Genomic Taxonomy of the Prochlorococcus Collective | 10.1007/s00248-020-01526-5 | 2020 |
| Conserved rhodolith microbiomes across environmental gradients of the Great Amazon Reef | 10.1016/j.scitotenv.2020.143411 | 2020 |
| Ecogenomics and metabolic potential of the South Atlantic Ocean microbiome | 10.1016/j.scitotenv.2020.142758 | 2020 |
| Mussismilia braziliensis White Plague Disease Is Characterized by an Affected Coral Immune System and Dysbiosis | 10.1007/s00248-020-01588-5 | 2020 |
| Genomic basis of antibiotic resistance in Vibrio parahaemolyticus strain JPA1 | 10.1590/0074-02760190053 | 2019 |
| Environmental modulation of the proteomic profiles from closely phylogenetically related populations of the red seaweed Plocamium brasiliense | 10.7717/peerj.6469 | 2019 |
| - Candidatus Colwellia aromaticivorans- sp. nov., - Candidatus Halocyntiibacter alkanivorans- sp. nov., and - Candidatus Ulvibacter alkanivorans- sp. nov. Genome Sequences | 10.1128/mra.00086-19 | 2019 |
| Metagenomics sheds light on the metabolic repertoire of oil-biodegrading microbes of the South Atlantic Ocean | 10.1016/j.envpol.2019.03.007 | 2019 |
| Metagenomic Analysis of the Whole Gut Microbiota in Brazilian Termitidae Termites Cornitermes cumulans, Cyrilliotermes strictinasus, Syntermes dirus, Nasutitermes jaraguae, Nasutitermes aquilinus, Grigiotermes bequaerti, and Orthognathotermes mirim | 10.1007/s00284-019-01662-3 | 2019 |
| Halomonas coralii sp. nov. Isolated from Mussismilia braziliensis | 10.1007/s00284-019-01674-z | 2019 |
| Modelling the influence of environmental parameters over marine planktonic microbial communities using artificial neural networks | 10.1016/j.scitotenv.2019.04.009 | 2019 |
| Enterovibrio baiacu sp. nov. | 10.1007/s00284-019-01785-7 | 2019 |
| Remote sensing, isotopic composition and metagenomics analyses revealed Doce River ore plume reached the southern Abrolhos Bank Reefs | 10.1016/j.scitotenv.2019.134038 | 2019 |
| Description of Alteromonas abrolhosensis sp. nov., isolated from sea water of Abrolhos Bank, Brazil | 10.1007/s10482-018-1016-x | 2018 |
| Vibrio tapetis Displays an Original Type IV Secretion System in Strains Pathogenic for Bivalve Molluscs | 10.3389/fmicb.2018.00227 | 2018 |
| Microbial and Functional Biodiversity Patterns in Sponges that Accumulate Bromopyrrole Alkaloids Suggest Horizontal Gene Transfer of Halogenase Genes | 10.1007/s00248-018-1172-6 | 2018 |
| Genomic Attributes of Novel Symbiont Pseudovibrio brasiliensis sp. nov. Isolated From the Sponge Arenosclera brasiliensis | 10.3389/fmars.2018.00081 | 2018 |
| Perspectives on the Great Amazon Reef: Extension, Biodiversity, and Threats | 10.3389/fmars.2018.00142 | 2018 |
| Rapid isolation of culturable microalgae from a tropical shallow lake system | 10.1007/s10811-018-1404-7 | 2018 |
| Metagenomics of Coral Reefs Under Phase Shift and High Hydrodynamics | 10.3389/fmicb.2018.02203 | 2018 |
| Rhodoliths holobionts in a changing ocean: host-microbes interactions mediate coralline algae resilience under ocean acidification | 10.1186/s12864-018-5064-4 | 2018 |
| Metagenomics Sheds Light on the Ecology of Marine Microbes and Their Viruses | 10.1016/j.tim.2018.05.015 | 2018 |
| Marine Biotechnology in Brazil: Recent Developments and Its Potential for Innovation | 10.3389/fmars.2018.00236 | 2018 |
| Inhibitory effect of microalgae and cyanobacteria extracts on influenza virus replication and neuraminidase activity | 10.7717/peerj.5716 | 2018 |
| Atlantic Forest loss caused by the world´s largest tailing dam collapse (Fundão Dam, Mariana, Brazil) | 10.1016/j.rsase.2018.08.003 | 2018 |
| Genome Sequences of Vibrio maerlii sp. nov. and Vibrio rhodolitus sp. nov., Isolated from Rhodoliths | 10.1128/mra.01039-18 | 2018 |
| Insights on the freshwater microbiomes metabolic changes associated with the world's largest mining disaster | 10.1016/j.scitotenv.2018.11.112 | 2018 |
| Cultures of the Marine Bacterium Pseudovibrio denitrificans Ab134 Produce Bromotyrosine-Derived Alkaloids Previously Only Isolated from Marine Sponges | 10.1021/acs.jnatprod.6b00838 | 2017 |
| Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans | 10.1038/ncomms15955 | 2017 |
| The Deep-Sea Microbial Community from the Amazonian Basin Associated with Oil Degradation | 10.3389/fmicb.2017.01019 | 2017 |
| Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle | 10.3389/fmicb.2017.00784 | 2017 |
| Microbial processes driving coral reef organic carbon flow | 10.1093/femsre/fux018 | 2017 |
| Draft Genome Sequence of Pseudoalteromonas sp. Strain PAB 2.2 Isolated from Abrolhos Bank (Brazil) | 10.1128/genomea.00016-17 | 2017 |
| Unlocking Marine Biotechnology in the Developing World | 10.1016/j.tibtech.2017.08.005 | 2017 |
| Ecogenomics and Taxonomy of Cyanobacteria Phylum | 10.3389/fmicb.2017.02132 | 2017 |
| Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon | 10.1128/msphere.00366-17 | 2017 |
| Quantitative Detection of Active Vibrios Associated with White Plague Disease in Mussismilia braziliensis Corals | 10.3389/fmicb.2017.02272 | 2017 |
| Molecular Mechanisms for Microbe Recognition and Defense by the Red Seaweed | 10.1128/mSphere.00094-17 | 2017 |
| Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach | 10.1007/s10482-016-0649-x | 2016 |
| Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus | 10.7717/peerj.1522 | 2016 |
| Microbial Community Profile and Water Quality in a Protected Area of the Caatinga Biome | 10.1371/journal.pone.0148296 | 2016 |
| Lytic to temperate switching of viral communities | 10.1038/nature17193 | 2016 |
| An extensive reef system at the Amazon River mouth | 10.1126/sciadv.1501252 | 2016 |
| Metaproteomics reveals metabolic transitions between healthy and diseased stony coral | 10.1111/mec.13775 | 2016 |
| Taxonomic and Functional Metagenomic Signature of Turfs in the Abrolhos Reef System (Brazil) | 10.1371/journal.pone.0161168 | 2016 |
| Proposal of fifteen new species of Parasynechococcus based on genomic, physiological and ecological features | 10.1007/s00203-016-1256-y | 2016 |
| Cloning and Functional Characterization of Cycloartenol Synthase from the Red Seaweed Laurencia dendroidea | 10.1371/journal.pone.0165954 | 2016 |
| Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan | 10.1016/j.syapm.2016.04.002 | 2016 |
| Insights from genome of Clostridium butyricum INCQS635 reveal mechanisms to convert complex sugars for biofuel production | 10.1007/s00203-015-1166-4 | 2016 |
| Multiple Symbiodinium Strains Are Hosted by the Brazilian Endemic Corals Mussismilia spp. | 10.1007/s00248-015-0573-z | 2015 |
| Diversity and ecological structure of vibrios in benthic and pelagic habitats along a latitudinal gradient in the Southwest Atlantic Ocean | 10.7717/peerj.741 | 2015 |
| Finding diagnostic phenotypic features of Photobacterium in the genome sequences | 10.1007/s10482-015-0414-6 | 2015 |
| New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) | 10.3390/md13020879 | 2015 |
| Microbial and sponge loops modify fish production in phase-shifting coral reefs | 10.1111/1462-2920.12851 | 2015 |
| Environmental and Sanitary Conditions of Guanabara Bay, Rio de Janeiro | 10.3389/fmicb.2015.01232 | 2015 |
| Turbulence-driven shifts in holobionts and planktonic microbial assemblages in St. Peter and St. Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.3389/fmicb.2015.01038 | 2015 |
| BaMBa: towards the integrated management of Brazilian marine environmental data | 10.1093/database/bav088 | 2015 |
| Advanced Microbial Taxonomy Combined with Genome-Based-Approaches Reveals that Vibrio astriarenae sp. nov., an Agarolytic Marine Bacterium, Forms a New Clade in Vibrionaceae | 10.1371/journal.pone.0136279 | 2015 |
| Baseline Assessment of Mesophotic Reefs of the Vitória-Trindade Seamount Chain Based on Water Quality, Microbial Diversity, Benthic Cover and Fish Biomass Data | 10.1371/journal.pone.0130084 | 2015 |
| Genotype to phenotype: identification of diagnostic vibrios phenotypes using whole genome sequences | 10.1099/ijs.0.057927-0 | 2014 |
| Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake | 10.1186/1471-2164-15-473 | 2014 |
| Vibrio madracius sp. nov. Isolated from Madracis decactis (Scleractinia) in St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.1007/s00284-014-0600-1 | 2014 |
| Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions | 10.1186/1471-2164-15-654 | 2014 |
| Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil | 10.7717/peerj.427 | 2014 |
| Diversity and antimicrobial potential of culturable heterotrophic bacteria associated with the endemic marine sponge Arenosclera brasiliensis | 10.7717/peerj.419 | 2014 |
| Microbial community diversity and physical-chemical features of the Southwestern Atlantic Ocean | 10.1007/s00203-014-1035-6 | 2014 |
| Oenococcus alcoholitolerans sp. nov., a lactic acid bacteria isolated from cachaça and ethanol fermentation processes | 10.1007/s10482-014-0296-z | 2014 |
| Microbial taxonomy in the post-genomic era: Rebuilding from scratch? | 10.1007/s00203-014-1071-2 | 2014 |
| Exploring the Genome of a Butyric Acid Producer, Clostridium butyricum INCQS635 | 10.1128/genomea.01169-14 | 2014 |
| Exploring the Genome of Cheese Starter Lactic Acid Bacterium Lactococcus lactis subsp. lactis CECT 4433 | 10.1128/genomea.01142-14 | 2014 |
| Cholera Outbreaks in Nigeria Are Associated with Multidrug Resistant Atypical El Tor and Non-O1/Non-O139 Vibrio cholerae | 10.1371/journal.pntd.0002049 | 2013 |
| Streptococcal taxonomy based on genome sequence analyses | 10.3410/f1000research.2-67.v1 | 2013 |
| Genomic Taxonomy of the Genus Prochlorococcus | 10.1007/s00248-013-0270-8 | 2013 |
| Microbial genomic taxonomy | 10.1186/1471-2164-14-913 | 2013 |
| Structuring of Bacterioplankton Diversity in a Large Tropical Bay | 10.1371/journal.pone.0031408 | 2012 |
| Genome Sequence of the Marine Bacterium Vibrio campbellii DS40M4, Isolated from Open Ocean Water | 10.1128/JB.06583-11 | 2012 |
| Genome Sequences of the Ethanol-Tolerant Lactobacillus vini Strains LMG 23202T and JP7.8.9 | 10.1128/jb.00446-12 | 2012 |
| Genome Sequence of the Bacterioplanktonic, Mixotrophic Vibrio campbellii Strain PEL22A, Isolated in the Abrolhos Bank | 10.1128/jb.00377-12 | 2012 |
| Genome-Wide Study of the Defective Sucrose Fermenter Strain of Vibrio cholerae from the Latin American Cholera Epidemic | 10.1371/journal.pone.0037283 | 2012 |
| Complete genome sequence of a sucrose-nonfermenting epidemic strain of Vibrio cholerae O1 from Brazil. | 10.1128/JB.00300-12 | 2012 |
| The genus Listonella MacDonell and Colwell 1986 is a later heterotypic synonym of the genus Vibrio Pacini 1854 (Approved Lists 1980) - A taxonomic opinion | 10.1099/ijs.0.030015-0 | 2011 |
| Complete Genome Sequence of the Marine Fish Pathogen Vibrio anguillarum Harboring the pJM1 Virulence Plasmid and Genomic Comparison with Other Virulent Strains of V. anguillarum and V. ordalii | 10.1128/IAI.05138-11 | 2011 |
| Verrucomicrobia in Brazilian Atlantic Forest Soil | 10.1128/AEM.02838-10 | 2011 |
| An MLSA-based online scheme for the rapid identification of Stenotrophomonas isolates. | 2011 | |
| Towards a genome based taxonomy of Mycoplasmas | 10.1016/j.meegid.2011.07.020 | 2011 |
| The Synthesium Brachycladiidae Odhner, 1905 (Digenea) association with hosts based on nuclear and mitochondrial genes | 10.1016/j.parint.2011.08.008 | 2011 |
| Genome Sequence of the Human Pathogen Vibrio cholerae Amazonia | 10.1128/JB.05643-11 | 2011 |
| Vibrio cholerae O1 lineages driving cholera outbreaks during seventh cholera pandemic in Ghana | 10.1016/j.meegid.2011.08.020 | 2011 |
| Photobacterium jeanii sp. nov., isolated from corals and zoanthids | 10.1099/ijs.0.019968-0 | 2010 |
| Vibrio2009: the third international conference on the biology of Vibrios | 10.1111/j.1365-2958.2010.07286.x | 2010 |
| Diversity and pathogenic potential of vibrios isolated from Abrolhos Bank corals | 10.1111/j.1758-2229.2009.00101.x | 2010 |
| Genomic diversity of vibrios associated with the Brazilian coral Mussismilia hispida and its sympatric zoanthids ( Palythoa caribaeorum , Palythoa variabilis and Zoanthus solanderi ) | 10.1111/j.1365-2672.2009.04149.x | 2009 |
| Genomic taxonomy of vibrios | 10.1186/1471-2148-9-258 | 2009 |
| Identification of Vibrio cholerae and Vibrio mimicus by multilocus sequence analysis (MLSA) | 10.1099/ijs.0.65461-0 | 2008 |
| Vibrios dominate as culturable nitrogen-fixing bacteria of the Brazilian coral Mussismilia hispida | 10.1016/j.syapm.2008.06.001 | 2008 |
| Phylogenetic analysis of vibrios and related species by means of atpA gene sequences | 10.1099/ijs.0.65223-0 | 2007 |
| Photobacterium rosenbergii sp. nov. and Enterovibrio coralii sp. nov., vibrios associated with coral bleaching. | 2005 | |
| Phylogeny and Molecular Identification of Vibrios on the Basis of Multilocus Sequence Analysis | 10.1128/aem.71.9.5107-5115.2005 | 2005 |
| Phylogeny and Identification of Enterococci by atpA Gene Sequence Analysis | 10.1128/jcm.43.5.2224-2230.2005 | 2005 |
| Use of recA as an alternative phylogenetic marker in the family Vibrionaceae | 10.1099/ijs.0.02963-0 | 2004 |
| Description of Vibrio fortis sp. nov. and V. hepatarius sp. nov., isolated from aquatic animals and the marine environment. | 2003 | |
| Description of Vibrio kanaloae sp. nov, Vibrio pomeroyi sp. nov. and Vibrio chagasii sp. nov., from sea water and marine animals. | 2003 | |
| Genomic Diversity of Clinical and Environmental Vibrio cholerae Strains Isolated in Brazil between 1991 and 2001 as Revealed by Fluorescent Amplified Fragment Length Polymorphism Analysis | 10.1128/jcm.41.5.1946-1950.2003 | 2003 |
| Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis. | 2003 | |
| Vibrio hispanicus sp. nov., isolated from Artemia sp. and seawater in Spain. | 2003 | |
| Vibrio neptunius sp. nov., V. brasiliensis sp. nov. and V. xuii sp. nov., isolated from the marine aquaculture environment (bivalves, fish, rotifers and shrimps). | 2003 | |
| Vibrio pacinii sp. nov., a new species isolated from cultured aquatic organisms. | 2003 | |
| Vibrio tasmaniensis sp. nov., isolated from Atlantic Salmon (Salmo salar L.) | 10.1078/072320203322337326 | 2003 |
| Vibrio rotiferianus sp. nov., isolated from cultures of the rotifer Brachionus plicatilis. | 2003 | |
| Monitoring of storm surges on Cassino beach | 2003 | |
| Enterovibrio norvegicus gen. nov., sp. nov., isolated from the gut of turbot (Scophthalmus maximus) larvae: a new member of the family Vibrionaceae. | 10.1099/00207713-52-6-2015 | 2002 |
| The Coral Bleaching Vibrio shiloi Kushmaro et al. 2001 is a Later Synonym of Vibrio mediterranei Pujalte and Garay 1986 | 10.1078/0723-2020-00065 | 2001 |