Diogo Antonio Tschoeke

Instituição:

Universidade Federal do Rio de Janeiro

Centro:

Centro de Tecnologia

Unidade:

Coordenação dos Programas de Pós-Graduação de Engenharia

Departamento:

Programa de Engenharia Biomédica/COPPE

ORCID:

https://orcid.org/0000-0001-8134-4259


Formação:
  • Universidad Nacional Autónoma de Mexico

    | Pós-Doutorado | 2023 - 2023
  • Universidad de Buenos Aires

    | Pós-Doutorado | 2021 - 2022
  • Universidade Federal do Rio de Janeiro

    | Pós-Doutorado | 2014 - 2016
  • Fundação Oswaldo Cruz

    Biologia Computacional e Sistemas | Doutorado | 2010 - 2013
  • Fundação Oswaldo Cruz

    Biologia Computacional e Sistemas | Mestrado | 2008 - 2010
  • Universidade Federal de Santa Catarina

    Ciências Biológicas | Graduação | 2002 - 2007
  • Escola Técnica do Vale do Itajaí - Furb

    | Ensino Médio (2o grau) | 1999 - 2001
Laboratórios:
Nenhum laboratório cadastrado
Nuvens de Palavras:
Artigos:

(96.97% artigos com DOI)

Titulo DOI Ano
Global gene expression profile and functional analysis reveal the conservation of reproduction-associated gene networks in Gossypium hirsutum 10.1007/s00497-023-00491-6 2024
Water quality in marine and freshwater environments: a metagenomics approach 10.5753/jidm.2024.2624 2024
Current Status of Drinking Water Quality in a Latin American Megalopolis 10.3390/w15010165 2023
Brumadinho dam collapse induces changes in the microbiome and the antibiotic resistance of the Paraopeba River (Minas Gerais, Brazil) 10.1016/j.scitotenv.2022.161278 2023
Diversity of Microbiomes Across a 13,000-Year-Old Amazon Sediment 10.1007/s00248-023-02202-0 2023
Machine learning sheds light on physical-chemical and biological parameters leading to Abrolhos coral reef microbialization 10.1016/j.scitotenv.2023.164465 2023
Collapse of scallop Nodipecten nodosus production in the tropical Southeast Brazil as a possible consequence of global warming and water pollution 10.1016/j.scitotenv.2023.166873 2023
Transcriptome of the coral Mussismilia braziliensis symbiont Sargassococcus simulans 10.1016/j.margen.2021.100912 2022
Fluxes of the Amazon River plume nutrients and microbes into marine sponges 10.1016/j.scitotenv.2022.157474 2022
Vibrio fluminensis sp. nov. isolated from the skin of Southern Atlantic sharpnose-pufferfish (Canthigaster figueiredoi) 10.1007/s00203-022-03266-1 2022
Insights on the biochemical and cellular changes induced by heat stress in the Cladocopium isolated from coral Mussismilia braziliensis 10.3389/fmicb.2022.973980 2022
Dissecting Light Sensing and Metabolic Pathways on the Millimeter Scale in High‑Altitude Modern Stromatolites 10.1007/s00248-022-02112-7 2022
Genome sequence of Vibrio fluvialis 362.3 isolated from coral Mussismilia braziliensis reveals genes related to marine environment adaptation 10.1007/s00203-021-02279-6 2021
Insights into the genomic repertoire of Aquimarina litoralis CCMR20, a symbiont of coral Mussismilia braziliensis 10.1007/s00203-021-02194-w 2021
Genetic Evidence and Host Immune Response in Persons Reinfected with SARS-CoV-2, Brazil 10.3201/eid2705.204912 2021
Metagenomic Insights Into Ecosystem Function in the Microbial Mats of a Large Hypersaline Coastal Lagoon System 10.3389/fmars.2021.715335 2021
Risk of Collapse in Water Quality in the Guandu River (Rio de Janeiro, Brazil) 10.1007/s00248-021-01839-z 2021
Understanding small ORF diversity through a comprehensive transcription feature classification 10.1093/dnares/dsab007 2021
Mangrove microbiome reveals importance of sulfur metabolism in tropical coastal waters 10.1016/j.scitotenv.2021.151889 2021
Breviolum and Cladocopium Are Dominant Among Symbiodiniaceae of the Coral Holobiont Madracis decactis 10.1007/s00248-021-01868-8 2021
Oil leakage induces changes in deep-sea sediments of Campos Basin (Brazil) 10.1016/j.scitotenv.2020.139556 2020
Unlocking the Genomic Taxonomy of the Prochlorococcus Collective 10.1007/s00248-020-01526-5 2020
Rapid screening of marine bacterial symbionts using MALDI-TOF MS 10.1007/s00203-020-01917-9 2020
New bacterial and archaeal lineages discovered in organic rich sediments of a large tropical Bay 10.1016/j.margen.2020.100789 2020
Conserved Pigment Profiles in Phylogenetically Diverse Symbiotic Bacteria Associated with the Corals Montastraea cavernosa and Mussismilia braziliensis 10.1007/s00248-020-01551-4 2020
Glacial-interglacial transitions in microbiomes recorded in deep-sea sediments from the western equatorial Atlantic 10.1016/j.scitotenv.2020.140904 2020
A new genomic taxonomy system for the Synechococcus collective 10.1111/1462-2920.15173 2020
Conserved rhodolith microbiomes across environmental gradients of the Great Amazon Reef 10.1016/j.scitotenv.2020.143411 2020
Vibrio tetraodonis sp. nov.: genomic insights on the secondary metabolites repertoire 10.1007/s00203-020-02019-2 2020
Emergence of the East-Central-South-African genotype of Chikungunya virus in Brazil and the city of Rio de Janeiro may have occurred years before surveillance detection 10.1038/s41598-019-39406-9 2019
Metagenomics sheds light on the metabolic repertoire of oil-biodegrading microbes of the South Atlantic Ocean 10.1016/j.envpol.2019.03.007 2019
Halomonas coralii sp. nov. Isolated from Mussismilia braziliensis 10.1007/s00284-019-01674-z 2019
Metagenomic Analysis of the Whole Gut Microbiota in Brazilian Termitidae Termites Cornitermes cumulans, Cyrilliotermes strictinasus, Syntermes dirus, Nasutitermes jaraguae, Nasutitermes aquilinus, Grigiotermes bequaerti, and Orthognathotermes mirim 10.1007/s00284-019-01662-3 2019
Genomic basis of antibiotic resistance in Vibrio parahaemolyticus strain JPA1 10.1590/0074-02760190053 2019
[PROVISIONAL] Genome sequence of Shewanella corallii strain A687 isolated from pufferfish (Sphoeroides spengleri) 10.1590/1678-4685-gmb-2018-0314 2019
Enterovibrio baiacu sp. nov. 10.1007/s00284-019-01785-7 2019
Remote sensing, isotopic composition and metagenomics analyses revealed Doce River ore plume reached the southern Abrolhos Bank Reefs 10.1016/j.scitotenv.2019.134038 2019
Genomic repertoire of Mameliella alba Ep20 associated with Symbiodinium from the endemic coral Mussismilia braziliensis 10.1007/s13199-019-00655-x 2019
Do DNA lixo ao DNA luxo: sequências codificantes diminutas ganham destaque na ciência 2019
Description of Alteromonas abrolhosensis sp. nov., isolated from sea water of Abrolhos Bank, Brazil 10.1007/s10482-018-1016-x 2018
Microbial and Functional Biodiversity Patterns in Sponges that Accumulate Bromopyrrole Alkaloids Suggest Horizontal Gene Transfer of Halogenase Genes 10.1007/s00248-018-1172-6 2018
An observational clinical case of Zika virus-associated neurological disease is associated with primary IgG response and enhanced TNF levels 10.1099/jgv.0.001080 2018
Metagenomics of Coral Reefs Under Phase Shift and High Hydrodynamics 10.3389/fmicb.2018.02203 2018
Insights on the freshwater microbiomes metabolic changes associated with the world's largest mining disaster 10.1016/j.scitotenv.2018.11.112 2018
Genome Sequences of Vibrio maerlii sp. nov. and Vibrio rhodolitus sp. nov., Isolated from Rhodoliths 10.1128/mra.01039-18 2018
Pregnant women carrying microcephaly foetuses and Zika virus contain potentially pathogenic microbes and parasites in their amniotic fluid 10.1186/s12920-016-0242-1 2017
The clinically approved antiviral drug sofosbuvir inhibits Zika virus replication 10.1038/srep40920 2017
Draft Genome Sequence of sp. Strain PAB 2.2 Isolated from Abrolhos Bank (Brazil) 10.1128/genomeA.00016-17 2017
DEVELOPMENT OF STANDARD METHODS FOR ZIKA VIRUS PROPAGATION, TITRATION, AND PURIFICATION 10.1016/j.jviromet.2017.04.011 2017
ProtozoaDB 2.0: A Trypanosoma Brucei Case Study 10.3390/pathogens6030032 2017
Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon 10.1128/msphere.00366-17 2017
Molecular Mechanisms for Microbe Recognition and Defense by the Red Seaweed 10.1128/mSphere.00094-17 2017
Comparative genomics of Synechococcus and proposal of the new genus Parasynechococcus 10.7717/peerj.1522 2016
Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach 10.1007/s10482-016-0649-x 2016
Detection and sequencing of Zika virus from amniotic fluid of fetuses with microcephaly in Brazil: a case study 10.1016/s1473-3099(16)00095-5 2016
Taxonomic and Functional Metagenomic Signature of Turfs in the Abrolhos Reef System (Brazil) 10.1371/journal.pone.0161168 2016
New Insights on the Terpenome of the Red Seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) 10.3390/md13020879 2015
Draft Genome Sequence of sp. Strain MS-AsIII-49, an Arsenate-Reducing Isolate from Tropical Metal-Rich Sediment 10.1128/genomeA.00122-15 2015
STINGRAY: system for integrated genomic resources and analysis 10.1186/1756-0500-7-132 2014
An Orthology-Based Analysis of Pathogenic Protozoa Impacting Global Health: An Improved Comparative Genomics Approach with Prokaryotes and Model Eukaryote Orthologs 10.1089/omi.2013.0172 2014
Exploring the Genome of Cheese Starter Lactic Acid Bacterium Lactococcus lactis subsp. lactis CECT 4433 10.1128/genomeA.01142-14 2014
Exploring the Genome of a Butyric Acid Producer, Clostridium butyricum INCQS635 10.1128/genomeA.01169-14 2014
The Comparative Genomics and Phylogenomics of Leishmania amazonensis Parasite 10.4137/ebo.s13759 2014
Detecting distant homologies on protozoans metabolic pathways using scientific workflows 10.1504/IJDMB.2010.033520 2010
ProtozoaDB: dynamic visualization and exploration of protozoan genomes 10.1093/nar/gkm820 2007
Anotação Parcial do Transcriptoma de Trypanosoma rangeli utilizando a plataforma GARSA (GENOME ANALYSIS RESOURCES OF SEQUENCE ANNOTATION) 2005
Eventos:

(0.00% eventos com DOI)

Titulo DOI Ano
A influência de polimorfismos relacionados aos genes ACTN3 (rs1815739) e COL5A1 (rs12722) na recuperação após o dano muscular induzido por exercício excêntrico 2023
CLASSIFICAÇÃO DE GENES DE RESISTÊNCIA A ANTIBIÓTICOS UTILIZANDO APRENDIZADO DE MÁQUINA 2022
IDENTIFICAÇÃO DE MICRORGANISMOS PATOGÊNICOS E GENES DE RESISTÊNCIA A ANTIBIÓTICOS EM AMOSTRAS METAGENÔMICAS DO RIO GUANDU 2022
VIGILANCIA/ PROSPECÇÃO DE PATÓGENOS E ANTIMICROBIANOS EM METAGENOMAS DE ESPONJAS DO GRANDE RECIFE AMAZÔNICO 2022
VIGILÂNCIA METAGENÔMICA DE PATÓGENOS NO RIO PARAÍBA DO SUL 2022
ANÁLISES DE EXPRESSÃO IN SILICO DE GENES RELACIONADOS A ÁCIDO ABSCÍSICO EM SOLANUM LYCOPERSICUM SOB CONDIÇÕES DE ESTRESSE ABIÓTICO 2021
Metagenomic Insights of the Microbial Community from a Polluted River in Brazil 2020 2021
ANÁLISES DE EXPRESSÃO IN SILICO DE GENES RELACIONADOS A ÁCIDO ABSCÍSICO EM SOLANUM LYCOPERSICUM SOB CONDIÇÕES DE ESTRESSE ABIÓTICO 2021
Análise de pré-condições existentes em pacientes com COVID-19: aplicação de redes neurais na segmentação de pacientes 2021
Investigações evolutivas sobre um reservatório frutífero de novos genes 2020
GENÔMICA COMPARATIVA DE BACTÉRIAS DEGRADADORAS DE GÁS SULFÍDRICO E FIXADORAS DE CARBONO. 2019
PREDIÇÃO E CARACTERIZAÇÃO GENÔMICA DE NOVOS GENES DE SMALL ORFS POTENCIALMENTE CODIFICANTES 2019
ANÁLISES DE EXPRESSÃO IN SILICO DE GENES RELACIONADOS AO FITOHORMÔNIO ABA NO GÊNERO SOLANUM SOB CONDIÇÕES DE ESTRESSE ABIÓTICO. 2019
AVALIAÇÃO DO POTENCIAL DE BIORREMEDIAÇÃO DE ÓLEO RESIDUAL PELA LINHAGEM YARROWIA LIPOLYTICA 2019
DISCOVERY AND CHARACTERIZATION OF CODING SMALL ORFs: AN EVOLUTIONARY APPROACH 2019
AVALIAÇÃO DO POTENCIAL DE BIORREMEDIAÇÃO DE ÓLEO RESIDUAL DE FRITURA PELA LINHAGEM Yarrowia lipolytica. 2019
SmallORFs: a putative reservoir of new genes 2018
SmallORFs: a putative reservoir of new genes. 2018
Small ORFs: um potencial reservatório de novos e essenciais genes 2018
SMALL ORFS: UM POTENCIAL RESERVATÓRIO DE NOVOS E ESSENCIAIS GENES 2018
GENÔMICA COMPARATIVA DE BACTÉRIAS DEGRADADORAS DE GÁS SULFÍDRICO E FIXADORAS DE CARBONO. 2018
AVALIAÇÃO DO PERFIL DE EXPRESSÃO DAS FAMÍLIAS NHX E DREB NO GÊNERO SOLANUM SOB CONDIÇÕES DE ESTRESSE HÍDRICO E SALINO 2018
Comparative Genomcis of Sulfite Oxidation Bacteria 2018
IN SILICO EVALUATION OF THE EXPRESSION PROFILING OF NHX AND DREB FAMILIES OF SOLANUM GENUS AT HIDRYC AND SALINE STRESS CONDITIONS 2018
Small open reading frames (smORFs) in Rhodnius prolixus: prediction and characterization of new genes in the main vector of Chagas disease 2017
Pequenas sequências abertas de leitura (smORFs) em Rhodnius prolixus: predição e caracterização de novos genes no principal vetor da doença de Chagas 2017
Non-homologous Isofunctional Enzymes (NISE) between Leishmania amazonensis and Homo sapiens: a source for potential drug targets 2013
Intragenomic Non-homologous Isofunctional Enzymes (NISE) in Leishmania amazonensis 2013
COMPARATIVE ANALYSIS AND EXPLORATION OF THE TRICHOMONAS VAGINALIS AND GIARDIA LAMBLIA PROTEOMES 2013
On the particularities of Protozoa: inferring family expansions and orphans proteins 2013
The comparative genomics of Protozoa: identification and categorization of core, group and species-specific genes 2013
Towards a distributed/parallel comparative genomics workflow: Elastic-OrthoSearch 2013
Stingray@Galaxy: a pipeline for NGS data functional annotation in high performance computational environment 2013
On the particularities of Protozoa: a comparative genomics approach 2012
The phylogenomics of carbohydrate metabolism in Protozoa 2012
A comparative genomics approach for the study of Protozoa: looking for group-specific proteins 2012
ProtozoaDB 2.0: a new version for the comparative genomics of 22 pathogenic Protozoa species 2012
The phylogenomics of carbohydrate metabolism in Protozoa 2012
PROTOZOADB 2.0: a dedicated database for storage and analysis of protozoan genomes 2011
Exploring protozoan orthologous genes as markers for genotyping 2011
Comparative Genomics of Twenty-two Pathogenic Protozoa 2011
Comparative Genomics of Twenty-two Pathogenic Protozoa 2011
3D Interactome of five protozoa 2011
Initial Analysis of the Leishmania amazonensis Genome 2011
An integrated system to genotype parasitic Protozoa based on universal orthologous genes 2010
ProtozoaDB: towards a knowledgebase approach for a systems biology database. 2009
An integrated system for the genotyping of parasitic protozoan based on universal orthologous genesAn integrated system for the genotyping of parasitic protozoan based on universal orthologous genes 2009
EXPLORING PKS DOMAINS DIVERSITY PRESENT IN ENVIRONMENTAL DATABASE USING HMM PROFILES 2009
Using Scientific Workflows to detect distant homologies on protozoan metabolic pathways. 2008
OrthoSearch: a scientific workflow approach to detect distant homologies on protozoans. 2008
ProtozoaDB: towards an integrated database for the mining of protozoan genomes 2007
Projeto transcriptoma do Trypanosoma rangeli. 2007
Estudos Bioquímicos e Moleculares de Proteínas Tirosina Fosfatases em Trypanosoma rangeli 2006
Molecular studies on Trypanosoma rangeli Protein Tyrosine Phosphatase (PTP) 2006
Desenvolvimento e implementação de um sistema de acompanhamento de leishmanioses humanas em Santa Catarina 2006
Plataformas flutuantes para captura de pequenos mamíferos semi-aquáticos 2006
DESAFIOS E RECOMPENSAS DE UMA PRIMEIRA EXPERIÊNCIA COMO PROFESSOR EM UMA ESCOLA ESTADUAL DE SANTA CATARINA 2006
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