Alberto Paccanaro
Formação:
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Yale University
| Pós-Doutorado | 2003 - 2006
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Queen Mary - University of London
| Pós-Doutorado | 2002 - 2003
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University of Toronto
Computer Science | Doutorado | 1996 - 2002
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University of Milan
Computer Science | Graduação | 1984 - 1990
Laboratórios:
Nenhum laboratório cadastrado
Nuvens de Palavras:
Artigos:
(100.00% artigos com DOI)
| Titulo | DOI | Ano |
|---|---|---|
| LanDis: the disease landscape explorer | 10.1038/s41431-023-01511-9 | 2024 |
| A method for comparing multiple imputation techniques: A case study on the U.S. national COVID cohort collaborative | 10.1016/j.jbi.2023.104295 | 2023 |
| Heterogeneous data integration methods for patient similarity networks | 10.1093/bib/bbac207 | 2022 |
| Machine learning prediction of side effects for drugs in clinical trials | 10.1016/j.crmeth.2022.100358 | 2022 |
| Unlike Chloroquine, Mefloquine Inhibits SARS-CoV-2 Infection in Physiologically Relevant Cells | 10.3390/v14020374 | 2022 |
| Machine Learning and Network Medicine approaches for Drug Repositioning for COVID-19 | 10.1016/j.patter.2021.100396 | 2021 |
| Role of miR-2392 in Driving SARS-CoV-2 Infection | 10.1016/j.celrep.2021.109839 | 2021 |
| Protein function prediction for newly sequenced organisms | 10.1038/s42256-021-00419-7 | 2021 |
| Network modeling of patients' biomolecular profiles for clinical phenotype/outcome prediction | 10.1038/s41598-020-60235-8 | 2020 |
| LUMI-PCR: an Illumina platform ligation-mediated PCR protocol for integration site cloning, provides molecular quantitation of integration sites | 10.1186/s13100-020-0201-4 | 2020 |
| The corrected gene proximity map for analyzing the 3D genome organization using Hi-C data | 10.1186/s12859-020-03545-y | 2020 |
| Predicting the frequencies of drug side effects | 10.1038/s41467-020-18305-y | 2020 |
| Disease gene prediction for molecularly uncharacterized diseases | 10.1371/journal.pcbi.1007078 | 2019 |
| The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens | 10.1186/s13059-019-1835-8 | 2019 |
| Subclonal mutation selection in mouse lymphomagenesis identifies known cancer loci and suggests novel candidates | 10.1038/s41467-018-05069-9 | 2018 |
| Neurogenomic Signatures of Successes and Failures in Life-History Transitions in a Key Insect Pollinator | 10.1093/gbe/evx220 | 2017 |
| A network medicine approach to quantify distance between hereditary disease modules on the interactome | 10.1038/srep17658 | 2016 |
| mutation3D: Cancer Gene Prediction Through Atomic Clustering of Coding Variants in the Structural Proteome | 10.1002/humu.22963 | 2016 |
| An expanded evaluation of protein function prediction methods shows an improvement in accuracy | 10.1186/s13059-016-1037-6 | 2016 |
| GOssTo: a stand-alone application and a web tool for calculating semantic similarities on the Gene Ontology | 10.1093/bioinformatics/btu144 | 2014 |
| An extensive analysis of disease-gene associations using network integration and fast kernel-based gene prioritization methods | 10.1016/j.artmed.2014.03.003 | 2014 |
| Progressive promoter element combinations classify conserved orthogonal plant circadian gene expression modules | 10.1098/rsif.2014.0535 | 2014 |
| A large-scale evaluation of computational protein function prediction | 10.1038/nmeth.2340 | 2013 |
| Computational Selection of Transcriptomics Experiments Improves Guilt-by-Association Analyses | 10.1371/journal.pone.0039681 | 2012 |
| A Census of Human Soluble Protein Complexes | 10.1016/j.cell.2012.08.011 | 2012 |
| GFam: a platform for automatic annotation of gene families | 10.1093/nar/gks631 | 2012 |
| OsWRKY22, a monocot WRKY gene, plays a role in the resistance response to blast | 10.1111/j.1364-3703.2012.00795.x | 2012 |
| Exploring the evolutionary path of plant MAPK networks | 10.1016/j.tplants.2012.05.009 | 2012 |
| Detecting overlapping protein complexes in protein-protein interaction networks | 10.1038/nmeth.1938 | 2012 |
| Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty | 10.1093/bioinformatics/bts129 | 2012 |
| SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale | 10.1186/1471-2105-11-120 | 2010 |
| Quantifying environmental adaptation of metabolic pathways in metagenomics | 10.1073/pnas.0808022106 | 2009 |
| Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins | 10.1371/journal.pbio.1000096 | 2009 |
| Statistical analysis of the genomic distribution and correlation of regulatory elements in the ENCODE regions | 10.1101/gr.5573107 | 2007 |
| Spectral clustering of protein sequences | 10.1093/nar/gkj515 | 2006 |
| Global landscape of protein complexes in the yeast Saccharomyces cerevisiae | 10.1038/nature04670 | 2006 |
| Clustering of Pseudomonas aeruginosa transcriptomes from planktonic cultures, developing and mature biofilms reveals distinct expression profiles | 10.1186/1471-2164-7-162 | 2006 |
| Integration of curated databases to identify genotype-phenotype associations | 10.1186/1471-2164-7-257 | 2006 |
| Predicting interactions in protein networks by completing defective cliques | 10.1093/bioinformatics/btl014 | 2006 |
| Predicting essential genes in fungal genomes | 10.1101/gr.5144106 | 2006 |
| Learning distributed representations of concepts using linear relational embedding | 10.1109/69.917563 | 2001 |
| Using the tree representation of terms to recognize matching with neural networks | 10.1016/S0362-546X(97)00346-5 | 1997 |
| Using neural networks for recognizing matching among terms | 10.1007/BF02900896 | 1996 |
Eventos:
(31.03% eventos com DOI)
| Titulo | DOI | Ano |
|---|---|---|
| Learning Interpretable Disease Self-Representations for Drug Repositioning | 2019 | |
| A Recommender System Approach for Predicting Drug Side Effects | 10.1109/IJCNN.2018.8489025 | 2018 |
| Drug cocktail selection for the treatment of chagas disease: A multi-objective approach | 10.1109/clei.2017.8226465 | 2017 |
| Mining the biomedical literature to predict shared drug targets in DrugBank | 10.1109/CLEI.2017.8226376 | 2017 |
| Drug targets prediction using chemical similarity | 10.1109/CLEI.2016.7833353 | 2016 |
| Combining interactomes from multiple organisms: A case study on human-mouse | 10.1109/CLEI.2016.7833324 | 2016 |
| Network integration boosts disease gene prioritization | 2013 | |
| A Maximal Eigenvalue Method for Detecting Process Representative Genes by Integrating Data from Multiple Sources | 2008 | |
| Inferrng protein-protein interactions using interaction network topologies | 10.1109/IJCNN.2005.1555823 | 2005 |
| Spectral clustering of protein sequences | 10.1109/IJCNN.2003.1224064 | 2003 |
| Learning Distributed Representations of Concepts from Relational Data | 2002 | |
| Learning hierarchical structures with linear relational embedding | 10.5555/2980539.2980650 | 2001 |
| Extracting distributed representations of concepts and relations from positive and negative propositions | 10.1109/IJCNN.2000.857906 | 2000 |
| Recognizing Matching Among Terms: A Neural Network Approach | 1996 | |
| A Distributed Application for the Simplex Method | 1996 | |
| Recognizing Matching among Terms with a Neural Network: A Preliminary Study. | 1995 | |
| Using Neural Networks to Guide Term Simplification: Some Results for the Groups Theory | 1995 | |
| Using Neural Networks for Recognizing Matching among terms | 1995 | |
| Guiding Term Simplification using Neural Networks: Some results for the Groups Theory | 1995 | |
| Monitoring meeting evolution in CSCW: the Conviction and Agreement coefficients | 1995 | |
| Guiding Term Simplification in a Rewriting Based Automated Theorem Prover through a Neural Network | 1994 | |
| Using Neural Networks for guiding Term Simplification in a Rewriting Based Automated Theorem Prover: Some preliminary results | 1994 | |
| KBTeach: A Rewriting Based Automated Theorem Prover for Didactic Purposes | 1994 | |
| Using Modified Term Rewriting Systems for studying the behaviour of Stochastic Petri Nets. | 1994 | |
| Design and Implementation of an Interface for a function optimization tool based on Genetic Search techniques | 1994 | |
| Studying the behaviour of Petri Nets through a formalization as Term Rewriting Systems | 1993 | |
| Using rewriting techniques for studying the behaviour of Petri Nets | 1993 | |
| Report on KBLab: A laboratory for rewriting techniques | 1992 | |
| KBLab: A system for research and didactic of Rewriting Systems | 1992 |